ECOD: domain e2jirA1

Domain ID e2jirA1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: double psi
F: Molydop_binding

UID:	000020866
Type:	Automatic domain
Parent:	e1eu1A1
Range:	A:601-723
Ligands:	MGD NO2
PDB:	2jir
PDB Description:	PERIPLASMIC NITRATE REDUCTASE
UniProt:	P81186
Species:	Desulfovibrio desulfuricans

Domain
In chain context
In PDB context

Structure of domain e2jirA1

Domains in the same chain:

Download Pymol

e2jirA4	A:4-62	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e2jirA2	A:63-147,A:353-600	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e2jirA3	A:140-352	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e2jirA1	A:601-723	cradle loop barrel	RIFT-related	double psi

Domains in the same PDB:

e2jirA4	A:4-62	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e2jirA2	A:63-147,A:353-600	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e2jirA3	A:140-352	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e2jirA1	A:601-723	cradle loop barrel	RIFT-related	double psi

Structural contacts of domain e2jirA1 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2jirA2	A:Y,X-1,-Z->A:x,y,z	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Interaction Interface Pymol