Domain ID e2jjqA1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: S-adenosyl-L-methionine-dependent methyltransferases
  • F: tRNA_U5-meth_tr
UID: 000168518
Type: Automatic domain
Parent: e1uwvA4
Range: A:69-405
Ligands: GOL SAH
PDB: 2jjq
PDB Description: UNCHARACTERIZED RNA METHYLTRANSFERASE PYRAB10780
UniProt: Q9UZR7
Hsap BLAST neighbor: Q8IZ69
Species: Pyrococcus abyssi

Structure of domain e2jjqA1

Structural contacts of domain e2jjqA1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2jjqA2 A:x,y,z->A:X-1/2,-Y-1/2,-Z Nucleic acid-binding proteins Interaction Interface Pymol
e2jjqA1 A:x,y,z->A:X-1/2,-Y-1/2,-Z Rossmann-related Interaction Interface Pymol
e2jjqA2 A:X-1/2,-Y-1/2,-Z->A:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e2jjqA1 A:X-1/2,-Y-1/2,-Z->A:x,y,z Rossmann-related Interaction Interface Pymol
e2jjqA1 A:x,y,z->A:-X+1/2,-Y,Z-1/2 Rossmann-related Interaction Interface Pymol
e2jjqA1 A:-X+1/2,-Y,Z-1/2->A:x,y,z Rossmann-related Interaction Interface Pymol
e2jjqA2 A:-X+1/2,-Y,Z-1/2->A:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e2jjqA2 A:x,y,z->A:X-1/2,-Y+1/2,-Z Nucleic acid-binding proteins Interaction Interface Pymol
e2jjqA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z Rossmann-related Interaction Interface Pymol
e2jjqA1 A:X-1/2,-Y+1/2,-Z->A:x,y,z Rossmann-related Interaction Interface Pymol
e2jjqA2 A:-X+3/2,-Y,Z-1/2->A:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e2jjqA1 A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Rossmann-related Interaction Interface Pymol
e2jjqA1 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z Rossmann-related Interaction Interface Pymol