Domain ID e2jkvB2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NAD(P)-binding Rossmann-fold domains
  • F: NAD_binding_2
UID: 000371807
Type: Automatic domain
Parent: e2pgdA2
Range: B:2-177
Ligands: CL NAP
PDB: 2jkv
PDB Description: 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING
UniProt: P52209
Hsap BLAST neighbor: P52209
Species: Homo sapiens

Structure of domain e2jkvB2

Domains in the same chain:

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e2jkvB2 B:2-177 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2jkvB1 B:178-483 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like

Domains in the same PDB:

e2jkvA2 A:2-177 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2jkvA1 A:178-483 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e2jkvB2 B:2-177 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2jkvB1 B:178-483 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e2jkvC2 C:2-177 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2jkvC1 C:178-483 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e2jkvD2 D:2-177 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2jkvD1 D:178-483 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e2jkvE2 E:2-177 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2jkvE1 E:178-483 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e2jkvF2 F:2-177 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2jkvF1 F:178-472 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like

Structural contacts of domain e2jkvB2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2jkvA1 B:x,y,z->A:X,Y,Z 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e2jkvF2 B:x,y,z->F:-X+1,Y-1/2,-Z Rossmann-related Interaction Interface Pymol
e2jkvE2 B:X,Y,Z->E:x,y,z Rossmann-related Interaction Interface Pymol