Domain ID e2jleA5

Download files:
  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: RNaseH-like domain in reverse transcriptase
  • T: RNaseH-like domain in reverse transcriptase
  • F: RVT_connect
UID: 001186960
Type: Automatic domain
Parent: e2zd1B3
Range: A:317-428
Ligands: I15
PDB: 2jle
PDB Description: REVERSE TRANSCRIPTASE/RNASEH
UniProt: Q72547
Species: Human immunodeficiency virus 1

Structure of domain e2jleA5

Domains in the same chain:

Download Pymol

e2jleA7 A:1-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2jleA6 A:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e2jleA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e2jleA8 A:428-545 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e2jleA7 A:1-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2jleA6 A:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e2jleA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e2jleA8 A:428-545 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2jleB6 B:3-230 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2jleB4 B:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e2jleB5 B:305-430 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e2jleA5 of H-group "RNaseH-like domain in reverse transcriptase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2jleB6 A:X,Y,Z->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2jleB5 A:X,Y,Z->B:x,y,z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e2jleA6 A:x,y,z->A:-X,Y,-Z+1/2 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e2jleA6 A:-X,Y,-Z+1/2->A:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e2jleB6 A:X-1/2,-Y-1/2,-Z->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol