ECOD: domain e2kfzA1

Domain ID e2kfzA1

A: alpha arrays
X: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
H: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
T: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
F: DNA_pol_A

UID:	000047530
Type:	Automatic domain
Parent:	e2hhvA1
Range:	A:720-843
Ligands:	MG
PDB:	2kfz
PDB Description:	KLENOW FRAGMENT OF DNA POLYMERASE I
UniProt:	P00582
Hsap BLAST neighbor:	O75417
Species:	Escherichia coli

Domains in the same chain:

Download Pymol

e2kfzA4	A:324-518	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2kfzA2	A:519-695	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I
e2kfzA3	A:696-719,A:844-927	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e2kfzA1	A:720-843	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Domains in the same PDB:

e2kfzA4	A:324-518	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2kfzA2	A:519-695	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I
e2kfzA3	A:696-719,A:844-927	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e2kfzA1	A:720-843	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Structural contacts of domain e2kfzA1 of H-group "helical bundle in Bacillus stearothermophilus-like DNA polymerase I":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2kfzA2	A:x,y,z->A:-X+1,-Y,Z-1/2	"fingers" domain in bacteriophage RB69-like DNA polymerase I	Interaction Interface Pymol
e2kfzA4	A:-X+1,-Y,Z-1/2->A:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e2kfzA2	A:-X+1,-Y,Z-1/2->A:x,y,z	"fingers" domain in bacteriophage RB69-like DNA polymerase I	Interaction Interface Pymol