ECOD: domain e2nxyA2

Domain ID e2nxyA2

A: a+b two layers
X: Ribosomal protein L31e-like
H: Ribosomal protein L31e/gp120 outer domain
T: Ribosomal protein L31e/gp120 outer domain
F: GP120

UID:	001826872
Type:	Manual and representative domain
Range:	A:256-473
Ligands:	HEZ NAG TRS
PDB:	2nxy
PDB Description:	ENVELOPE GLYCOPROTEIN GP120
UniProt:	Q49DS8
Species:	Human immunodeficiency virus 1

Domains in the same chain:

Download Pymol

e2nxyA3	A:83-255,A:474-491	gp120 inner domain	gp120 inner domain	gp120 inner domain
e2nxyA2	A:256-473	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain

Domains in the same PDB:

e2nxyA3	A:83-255,A:474-491	gp120 inner domain	gp120 inner domain	gp120 inner domain
e2nxyA2	A:256-473	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e2nxyB1	B:1001-1097	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2nxyB2	B:1098-1181	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2nxyC1	C:2001-2109	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2nxyC2	C:2110-2214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2nxyD1	D:3001-3128	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2nxyD2	D:3129-3229	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2nxyA2 of H-group "Ribosomal protein L31e/gp120 outer domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2nxyB1	A:x,y,z->B:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e2nxyD1	A:X,Y,Z->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2nxyA2	A:x,y,z->A:X,-Y,-Z+1	Ribosomal protein L31e/gp120 outer domain	Interaction Interface Pymol
e2nxyA2	A:X,-Y,-Z+1->A:x,y,z	Ribosomal protein L31e/gp120 outer domain	Interaction Interface Pymol
e2nxyD1	A:X,-Y,-Z+1->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2nxyD2	A:X-1,Y+1,Z->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2nxyC2	A:X-1,Y+1,Z->C:x,y,z	Immunoglobulin-related	Interaction Interface Pymol