ECOD: domain e2ny6B2

Domain ID e2ny6B2

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: C2-set

UID:	000038970
Type:	Automatic domain
Parent:	e1vcaA1
Range:	B:1098-1181
PDB:	2ny6
PDB Description:	T-cell surface glycoprotein CD4
UniProt:	P01730
Hsap BLAST neighbor:	P01730
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2ny6B2

Domains in the same chain:

Download Pymol

e2ny6B1	B:1001-1097	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ny6B2	B:1098-1181	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2ny6A2	A:83-255,A:474-491	gp120 inner domain	gp120 inner domain	gp120 inner domain
e2ny6A1	A:256-473	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e2ny6B1	B:1001-1097	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ny6B2	B:1098-1181	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ny6C1	C:2001-2109	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ny6C2	C:2110-2214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ny6D1	D:3001-3128	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ny6D2	D:3129-3228	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2ny6B2 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2ny6D2	B:X-1,Y,Z->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2ny6D1	B:X-1,Y,Z->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2ny6D1	B:-X+1,Y,-Z+1/2->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2ny6B2	B:x,y,z->B:-X+2,Y,-Z+1/2	Immunoglobulin-related	Interaction Interface Pymol
e2ny6B2	B:-X+2,Y,-Z+1/2->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2ny6C2	B:X-1,Y,Z->C:x,y,z	Immunoglobulin-related	Interaction Interface Pymol