ECOD: domain e2o5cB2

Domain ID e2o5cB2

A: alpha arrays
X: HTH
H: HTH
T: winged
F: Topoisom_bac

UID:	000317638
Type:	Automatic domain
Parent:	e1gl9C4
Range:	B:152-216,B:487-617,B:646-658
Ligands:	TDR
PDB:	2o5c
PDB Description:	DNA topoisomerase 3
UniProt:	P14294
Species:	Escherichia coli

Domains in the same chain:

Download Pymol

e2o5cB4	B:1-151	HAD domain-like	HAD domain-related	Toprim domain
e2o5cB2	B:152-216,B:487-617,B:646-658	HTH	HTH	winged
e2o5cB1	B:217-288,B:416-486	LigT-like	Prokaryotic type I DNA topoisomerase beta-barrel domain	Prokaryotic type I DNA topoisomerase beta-barrel domain
e2o5cB3	B:289-415	HTH	HTH	winged

Domains in the same PDB:

e2o5cA4	A:1-151	HAD domain-like	HAD domain-related	Toprim domain
e2o5cA2	A:152-216,A:487-617,A:646-659	HTH	HTH	winged
e2o5cA1	A:217-288,A:416-486	LigT-like	Prokaryotic type I DNA topoisomerase beta-barrel domain	Prokaryotic type I DNA topoisomerase beta-barrel domain
e2o5cA3	A:289-415	HTH	HTH	winged
e2o5cB4	B:1-151	HAD domain-like	HAD domain-related	Toprim domain
e2o5cB2	B:152-216,B:487-617,B:646-658	HTH	HTH	winged
e2o5cB1	B:217-288,B:416-486	LigT-like	Prokaryotic type I DNA topoisomerase beta-barrel domain	Prokaryotic type I DNA topoisomerase beta-barrel domain
e2o5cB3	B:289-415	HTH	HTH	winged

Structural contacts of domain e2o5cB2 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2o5cA4	B:x,y,z->A:X,Y,Z	HAD domain-related	Interaction Interface Pymol
e2o5cA2	B:x,y,z->A:X,Y,Z	HTH	Interaction Interface Pymol
e2o5cA4	B:-X+1/2,Y-1/2,-Z+3/4->A:x,y,z	HAD domain-related	Interaction Interface Pymol