ECOD: domain e2o6vF1

Domain ID e2o6vF1

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: ubiquitin

UID:	001037488
Type:	Automatic domain
Parent:	e1ogwA1
Range:	F:501-576
Ligands:	SO4
PDB:	2o6v
PDB Description:	Ubiquitin
UniProt:	P0CG48
Hsap BLAST neighbor:	P62979
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2o6vF1

Domains in the same chain:

Download Pymol

e2o6vF1	F:501-576	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Domains in the same PDB:

e2o6vA1	A:1-75	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2o6vB1	B:101-176	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2o6vC1	C:201-276	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2o6vD1	D:301-376	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2o6vE1	E:401-475	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2o6vF1	F:501-576	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2o6vG1	G:601-676	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2o6vH1	H:702-776	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Structural contacts of domain e2o6vF1 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2o6vE1	F:x,y,z->E:X,Y,Z	Ubiquitin-related	Interaction Interface Pymol
e2o6vH1	F:x,y,z->H:X-1/2,Y-1/2,Z	Ubiquitin-related	Interaction Interface Pymol
e2o6vG1	F:-X+1,Y,-Z->G:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e2o6vG1	F:X,Y,Z->G:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e2o6vG1	F:x,y,z->G:X-1/2,Y-1/2,Z	Ubiquitin-related	Interaction Interface Pymol
e2o6vH1	F:x,y,z->H:-X+1/2,Y-1/2,-Z	Ubiquitin-related	Interaction Interface Pymol
e2o6vF1	F:x,y,z->F:-X,Y,-Z	Ubiquitin-related	Interaction Interface Pymol
e2o6vF1	F:-X,Y,-Z->F:x,y,z	Ubiquitin-related	Interaction Interface Pymol