ECOD: domain e2o8cA5

Domain ID e2o8cA5

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: MutS_V

UID:	001188298
Type:	Automatic domain
Parent:	e1wb9A3
Range:	A:617-855
Ligands:	ADP MG
PDB:	2o8c
PDB Description:	DNA MISMATCH REPAIR PROTEIN MSH2
UniProt:	P43246
Hsap BLAST neighbor:	P43246
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2o8cA5

Domains in the same chain:

Download Pymol

e2o8cA7	A:1-125	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e2o8cA3	A:126-302	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2o8cA6	A:303-616	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e2o8cA5	A:617-855	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2o8cA7	A:1-125	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e2o8cA3	A:126-302	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2o8cA6	A:303-616	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e2o8cA5	A:617-855	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2o8cB1	B:362-521	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e2o8cB3	B:522-740	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2o8cB2	B:741-840,B:866-1084	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e2o8cB4	B:1085-1335	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2o8cA5 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2o8cB4	A:X,Y,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2o8cB3	A:X,Y,Z->B:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e2o8cA7	A:-Y-1/4,X+1/4,Z-1/4->A:x,y,z	DNA repair protein MutS, domain I	Interaction Interface Pymol