ECOD: domain e2odgB1

Domain ID e2odgB1

A: alpha arrays
X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: BAF

UID:	000047939
Type:	Automatic domain
Parent:	e1ci4A1
Range:	B:1-89
PDB:	2odg
PDB Description:	Barrier-to-autointegration factor
UniProt:	O75531
Hsap BLAST neighbor:	O75531
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e2odgB1	B:1-89	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Domains in the same PDB:

e2odgA1	A:1-89	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2odgB1	B:1-89	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2odgC1	C:2-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif

Structural contacts of domain e2odgB1 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2odgA1	B:X,Y,Z->A:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol
e2odgC1	B:x,y,z->C:X,Y,Z	LEM/SAP HeH motif	Interaction Interface Pymol