Domain ID e2oh2A4

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  • A: a+b two layers
  • X: Reverse ferredoxin
  • H: Lesion bypass DNA polymerase (Y-family), little finger domain
  • T: Lesion bypass DNA polymerase (Y-family), little finger domain
  • F: IMS_C
UID: 001145889
Type: Manual and representative domain
Range: A:406-517
PDB: 2oh2
PDB Description: DNA polymerase kappa
UniProt: Q9UBT6
Hsap BLAST neighbor: Q9UBT6
Species: Homo sapiens

Structure of domain e2oh2A4

Domains in the same chain:

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e2oh2A1 A:33-121,A:170-224,A:282-345 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2oh2A2 A:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e2oh2A3 A:346-405 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2oh2A4 A:406-517 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e2oh2A1 A:33-121,A:170-224,A:282-345 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2oh2A2 A:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e2oh2A3 A:346-405 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2oh2A4 A:406-517 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e2oh2B3 B:21-121,B:170-224,B:282-345 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2oh2B4 B:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e2oh2B1 B:346-405 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2oh2B2 B:406-517 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e2oh2A4 of H-group "Lesion bypass DNA polymerase (Y-family), little finger domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2oh2B2 A:x,y,z->B:-X+1/2,-Y+1/2,Z-1/2 Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol