Domain ID e2ojeB1

Download files:
  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000038904
Type: Automatic domain
Parent: e1k5nB1
Range: B:95-190
PDB: 2oje
PDB Description: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DRB1-1 BETA CHAIN PRECURSOR
UniProt: P04229
Hsap BLAST neighbor: P01911
Species: Homo sapiens

Structure of domain e2ojeB1

Domains in the same chain:

e2ojeB2 B:1-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e2ojeB1 B:95-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2ojeA2 A:13-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e2ojeA1 A:83-179 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ojeB2 B:1-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e2ojeB1 B:95-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ojeD2 D:1-124 N-cbl like Superantigen MAM N-terminal domain Superantigen MAM N-terminal domain
e2ojeD1 D:125-212 Superantigen MAM C-terminal domain Superantigen MAM C-terminal domain Superantigen MAM C-terminal domain
e2ojeE2 E:13-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e2ojeE1 E:83-179 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ojeF2 F:1-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e2ojeF1 F:95-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ojeH2 H:1-124 N-cbl like Superantigen MAM N-terminal domain Superantigen MAM N-terminal domain
e2ojeH1 H:125-212 Superantigen MAM C-terminal domain Superantigen MAM C-terminal domain Superantigen MAM C-terminal domain

Structural contacts of domain e2ojeB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ojeA1 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e2ojeA2 B:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e2ojeB1 B:x,y,z->B:X,-Y,-Z+1 Immunoglobulin-related Interaction Interface Pymol
e2ojeB1 B:X,-Y,-Z+1->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2ojeB1 B:x,y,z->B:-X+1,-Y,Z Immunoglobulin-related Interaction Interface Pymol
e2ojeB1 B:x,y,z->B:-X+1,-Y,Z Immunoglobulin-related Interaction Interface Pymol
e2ojeB1 B:-X+1,-Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2ojeB1 B:-X+1,-Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2ojeH1 B:-X+1/2,Y-1/2,-Z+1/2->H:x,y,z Superantigen MAM C-terminal domain Interaction Interface Pymol
e2ojeB1 B:x,y,z->B:-X+1,Y,-Z+1 Immunoglobulin-related Interaction Interface Pymol
e2ojeB1 B:-X+1,Y,-Z+1->B:x,y,z Immunoglobulin-related Interaction Interface Pymol