ECOD: domain e2okcA2

Domain ID e2okcA2

A: alpha arrays
X: N-terminal helical domain in restriction-modification system methylation subunit-like
H: N-terminal helical domain in restriction-modification system methylation subunit
T: N-terminal helical domain in restriction-modification system methylation subunit
F: HsdM_N

UID:	001548121
Type:	Manual and representative domain
Range:	A:9-147
Ligands:	IPA
PDB:	2okc
PDB Description:	Type I restriction enzyme StySJI M protein
UniProt:	Q89Z59
Species:

Domain
In chain context
In PDB context

Structure of domain e2okcA2

Domains in the same chain:

Download Pymol

e2okcA2	A:9-147	N-terminal helical domain in restriction-modification system methylation subunit-like	N-terminal helical domain in restriction-modification system methylation subunit	N-terminal helical domain in restriction-modification system methylation subunit
e2okcA3	A:148-433	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Domains in the same PDB:

e2okcA2	A:9-147	N-terminal helical domain in restriction-modification system methylation subunit-like	N-terminal helical domain in restriction-modification system methylation subunit	N-terminal helical domain in restriction-modification system methylation subunit
e2okcA3	A:148-433	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2okcB2	B:7-147	N-terminal helical domain in restriction-modification system methylation subunit-like	N-terminal helical domain in restriction-modification system methylation subunit	N-terminal helical domain in restriction-modification system methylation subunit
e2okcB1	B:148-432	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Structural contacts of domain e2okcA2 of H-group "N-terminal helical domain in restriction-modification system methylation subunit":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2okcA3	A:x,y,z->A:-X+2,Y-1/2,-Z+3/2	Rossmann-related	Interaction Interface Pymol
e2okcB1	A:X,Y,Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e2okcB2	A:X,Y,Z->B:x,y,z	N-terminal helical domain in restriction-modification system methylation subunit	Interaction Interface Pymol