ECOD: domain e2omyA4

Domain ID e2omyA4

A: alpha arrays
X: EF-hand
H: EF-hand-related
T: EF-hand
F: Internalin_N

UID:	001173518
Type:	Automatic domain
Parent:	e1h6tA4
Range:	A:36-77
Ligands:	CL
PDB:	2omy
PDB Description:	Internalin-A
UniProt:	P0DJM0
Species:

Domain
In chain context
In PDB context

Structure of domain e2omyA4

Domains in the same chain:

Download Pymol

e2omyA4	A:36-77	EF-hand	EF-hand-related	EF-hand
e2omyA3	A:78-416	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e2omyA5	A:417-496	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2omyA4	A:36-77	EF-hand	EF-hand-related	EF-hand
e2omyA3	A:78-416	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e2omyA5	A:417-496	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2omyB1	B:-2-100	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2omyA4 of H-group "EF-hand-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2omyA3	A:-X+3/2,-Y+1,Z-1/2->A:x,y,z	Leucine-rich repeats	Interaction Interface Pymol
e2omyA3	A:X-1/2,-Y+3/2,-Z+2->A:x,y,z	Leucine-rich repeats	Interaction Interface Pymol
e2omyB1	A:x,y,z->B:X-1/2,-Y+3/2,-Z+2	Immunoglobulin-related	Interaction Interface Pymol
e2omyA5	A:-X+5/2,-Y+1,Z-1/2->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2omyB1	A:-X+3/2,-Y+1,Z-1/2->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol