Domain ID e2otdB1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: GDPD
UID: 000316138
Type: Automatic domain
Parent: e1o1zA1
Range: B:2-246
Ligands: PO4
PDB: 2otd
PDB Description: GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE
UniProt: Q83PU8
Hsap BLAST neighbor: Q9NZC3
Species: Shigella flexneri

Structure of domain e2otdB1

Structural contacts of domain e2otdB1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2otdA1 B:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e2otdC1 B:-X+5/2,-Y+1,Z-1/2->C:x,y,z TIM barrels Interaction Interface Pymol
e2otdD1 B:x,y,z->D:X-1/2,-Y+3/2,-Z TIM barrels Interaction Interface Pymol
e2otdA1 B:x,y,z->A:X,Y-1,Z TIM barrels Interaction Interface Pymol