ECOD: domain e2paqB1

Domain ID e2paqB1

A: alpha complex topology
X: PDEase-like
H: HD-domain/PDEase-like
T: HD-domain/PDEase-like
F: YfbR-like

UID:	000061326
Type:	Automatic domain
Parent:	e2paqA1
Range:	B:2-187
PDB:	2paq
PDB Description:	5'-deoxynucleotidase YfbR
UniProt:	P76491
Species:

Domains in the same chain:

Download Pymol

e2paqB1	B:2-187	PDEase-like	HD-domain/PDEase-like	HD-domain/PDEase-like

Domains in the same PDB:

e2paqA1	A:2-187	PDEase-like	HD-domain/PDEase-like	HD-domain/PDEase-like
e2paqB1	B:2-187	PDEase-like	HD-domain/PDEase-like	HD-domain/PDEase-like

Structural contacts of domain e2paqB1 of H-group "HD-domain/PDEase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2paqA1	B:x,y,z->A:X,Y,Z	HD-domain/PDEase-like	Interaction Interface Pymol
e2paqA1	B:x,y,z->A:-Y,X-Y,Z	HD-domain/PDEase-like	Interaction Interface Pymol
e2paqA1	B:x,y,z->A:-X+Y+2/3,-X+1/3,Z+1/3	HD-domain/PDEase-like	Interaction Interface Pymol
e2paqB1	B:x,y,z->B:-Y,X-Y,Z	HD-domain/PDEase-like	Interaction Interface Pymol
e2paqB1	B:-Y,X-Y,Z->B:x,y,z	HD-domain/PDEase-like	Interaction Interface Pymol
e2paqB1	B:x,y,z->B:-X+Y+2/3,-X+1/3,Z+1/3	HD-domain/PDEase-like	Interaction Interface Pymol
e2paqB1	B:-X+Y+2/3,-X+1/3,Z+1/3->B:x,y,z	HD-domain/PDEase-like	Interaction Interface Pymol
e2paqA1	B:x,y,z->A:-X+Y+2/3,-X+1/3,Z-2/3	HD-domain/PDEase-like	Interaction Interface Pymol
e2paqA1	B:x,y,z->A:X,Y,Z-1	HD-domain/PDEase-like	Interaction Interface Pymol
e2paqB1	B:x,y,z->B:X,Y,Z-1	HD-domain/PDEase-like	Interaction Interface Pymol
e2paqB1	B:X,Y,Z-1->B:x,y,z	HD-domain/PDEase-like	Interaction Interface Pymol