Domain ID e2pbwA2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001522120
Type: Automatic domain
Parent: e1mqiA3
Range: A:4-107,A:215-251
Ligands: DOQ
PDB: 2pbw
PDB Description: Glutamate receptor, ionotropic kainate 1
UniProt: P22756
Hsap BLAST neighbor: P39086
Species: Rattus norvegicus

Structure of domain e2pbwA2

Structural contacts of domain e2pbwA2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2pbwB2 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2pbwB2 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2pbwB2 A:x,y,z->B:-Y-1/2,X-1/2,Z+1/4 Periplasmic binding protein-like II Interaction Interface Pymol
e2pbwA2 A:x,y,z->A:X-1/2,-Y-1/2,-Z+3/4 Periplasmic binding protein-like II Interaction Interface Pymol
e2pbwA2 A:X-1/2,-Y-1/2,-Z+3/4->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2pbwA2 A:x,y,z->B:-Y-1,-X,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e2pbwB2 A:-Y,-X,-Z+1/2->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol