Domain ID e2pfoA3

Download files:
  • A: a+b three layers
  • X: Nucleotidyltransferase-like
  • H: Nucleotidyltransferase
  • T: Nucleotidyltransferase
  • F: DNA_pol_B_thumb,DNA_pol_B_palm
UID: 000078151
Type: Automatic domain
Parent: e2fmpA3
Range: A:386-575
Ligands: DUP EDO MG MN NA
PDB: 2pfo
PDB Description: DNA polymerase lambda
UniProt: Q9UGP5
Hsap BLAST neighbor: Q9UGP5
Species: Homo sapiens

Structure of domain e2pfoA3

Structural contacts of domain e2pfoA3 of H-group "Nucleotidyltransferase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2pfoA1 A:X-1/2,-Y+1/2,-Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e2pfoA2 A:X,Y-1,Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e2pfoA2 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol