Domain ID e2pgnB3

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_C
UID: 000340440
Type: Automatic domain
Parent: e1pvdA3
Range: B:371-567
Ligands: CXO FAD MG P6G TPP
PDB: 2pgn
PDB Description: Cyclohexane-1,2-dione Hydrolase (Cdh)
Hsap BLAST neighbor: A1L0T0
Species:

Structure of domain e2pgnB3

Structural contacts of domain e2pgnB3 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2pgnA3 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgnA2 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgnB2 B:x,y,z->B:-Y+1/2,X-1/2,Z+1/4 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgnB3 B:x,y,z->B:-Y+1/2,X-1/2,Z+1/4 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgnB3 B:-Y+1/2,X-1/2,Z+1/4->B:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgnB1 B:-Y+1/2,X-1/2,Z+1/4->B:x,y,z Rossmann-related Interaction Interface Pymol