Domain ID e2pgoB1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: DHS-like NAD/FAD-binding domain
  • F: TPP_enzyme_M
UID: 000340444
Type: Automatic domain
Parent: e2ez9A1
Range: B:186-370
Ligands: CL FAD
PDB: 2pgo
PDB Description: Cyclohexane-1,2-dione Hydrolase (Cdh)
Hsap BLAST neighbor: Q9UJ83
Species:

Structure of domain e2pgoB1

Structural contacts of domain e2pgoB1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2pgoA2 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgoB1 B:x,y,z->B:-Y+1,-X+1,-Z+1/2 Rossmann-related Interaction Interface Pymol
e2pgoB2 B:x,y,z->B:-Y+1,-X+1,-Z+1/2 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgoB2 B:-Y+1,-X+1,-Z+1/2->B:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgoB1 B:-Y+1,-X+1,-Z+1/2->B:x,y,z Rossmann-related Interaction Interface Pymol
e2pgoB3 B:x,y,z->B:-Y+1/2,X-1/2,Z+1/4 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgoB1 B:x,y,z->B:-Y+1/2,X-1/2,Z+1/4 Rossmann-related Interaction Interface Pymol
e2pgoB3 B:-Y+1/2,X-1/2,Z+1/4->B:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgoB1 B:-Y+1/2,X-1/2,Z+1/4->B:x,y,z Rossmann-related Interaction Interface Pymol
e2pgoA2 B:-Y+1/2,X-1/2,Z+1/4->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgoA2 B:X-1/2,-Y+1/2,-Z+3/4->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2pgoA1 B:x,y,z->A:-Y+3/2,X-1/2,Z+1/4 Rossmann-related Interaction Interface Pymol