ECOD: domain e2pidA1

Domain ID e2pidA1

A: a/b three-layered sandwiches
X: HUP domain-like
H: HUP domains
T: HUP domains
F: tRNA-synt_1b

UID:	000166048
Type:	Automatic domain
Parent:	e1jilA1
Range:	A:37-373
Ligands:	YSA
PDB:	2pid
PDB Description:	Tyrosyl-tRNA synthetase
UniProt:	Q9Y2Z4
Hsap BLAST neighbor:	Q9Y2Z4
Species:	Homo sapiens

Structural contacts of domain e2pidA1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2pidB1	A:X,Y,Z->B:x,y,z	HUP domains	Interaction Interface Pymol
e2pidB1	A:x,y,z->B:-X,Y-1/2,-Z+1/2	HUP domains	Interaction Interface Pymol
e2pidB1	A:x,y,z->B:-X+1/2,-Y,Z-1/2	HUP domains	Interaction Interface Pymol
e2pidB1	A:-X,Y-1/2,-Z+1/2->B:x,y,z	HUP domains	Interaction Interface Pymol
e2pidA1	A:x,y,z->A:X-1/2,-Y+1/2,-Z	HUP domains	Interaction Interface Pymol
e2pidA1	A:X-1/2,-Y+1/2,-Z->A:x,y,z	HUP domains	Interaction Interface Pymol
e2pidB1	A:x,y,z->B:-X+1,Y-1/2,-Z+1/2	HUP domains	Interaction Interface Pymol
e2pidB1	A:x,y,z->B:-X-1/2,-Y,Z-1/2	HUP domains	Interaction Interface Pymol

e2pidA1	A:37-373	HUP domain-like	HUP domains	HUP domains
e2pidB1	B:37-373	HUP domain-like	HUP domains	HUP domains