Domain ID e2pks.1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: Trypsin,Thrombin_light
UID: 001042901
Type: Automatic domain
Parent: e1h8d.1
Range: A:7-33,B:37-183,C:185-286
Ligands: G44 NA
DrugDomain: DB07809
PDB: 2pks
PDB Description: Thrombin heavy chain fragment & Thrombin light chain
UniProt: P00734
Hsap BLAST neighbor: P00734
Species:

Structure of domain e2pks.1

Domains in the same chain:

e2pks.1 A:7-33,B:37-183,C:185-286 cradle loop barrel RIFT-related FMN-binding split barrel

Domains in the same PDB:

e2pks.1 A:7-33,B:37-183,C:185-286 cradle loop barrel RIFT-related FMN-binding split barrel

Structural contacts of domain e2pks.1 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2pks.1 C:x,y,z->B:X,Y,Z RIFT-related Interaction Interface Pymol
e2pks.1 B:X,Y,Z->C:x,y,z RIFT-related Interaction Interface Pymol
e2pks.1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e2pks.1 A:X,Y,Z->B:x,y,z RIFT-related Interaction Interface Pymol
e2pks.1 C:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e2pks.1 A:X,Y,Z->C:x,y,z RIFT-related Interaction Interface Pymol
e2pks.1 B:x,y,z->B:-X,Y,-Z RIFT-related Interaction Interface Pymol
e2pks.1 B:-X,Y,-Z->B:x,y,z RIFT-related Interaction Interface Pymol
e2pks.1 A:x,y,z->B:X-1/2,Y+1/2,Z RIFT-related Interaction Interface Pymol
e2pks.1 B:X-1/2,Y+1/2,Z->A:x,y,z RIFT-related Interaction Interface Pymol
e2pks.1 C:x,y,z->C:-X+1/2,Y-1/2,-Z+1 RIFT-related Interaction Interface Pymol
e2pks.1 C:-X+1/2,Y-1/2,-Z+1->C:x,y,z RIFT-related Interaction Interface Pymol
e2pks.1 C:x,y,z->B:-X+1,Y,-Z+1 RIFT-related Interaction Interface Pymol
e2pks.1 B:-X+1,Y,-Z+1->C:x,y,z RIFT-related Interaction Interface Pymol
e2pks.1 C:x,y,z->B:-X+1/2,Y-1/2,-Z+1 RIFT-related Interaction Interface Pymol
e2pks.1 B:-X+1/2,Y-1/2,-Z+1->C:x,y,z RIFT-related Interaction Interface Pymol
e2pks.1 A:x,y,z->A:-X,Y,-Z+1 RIFT-related Interaction Interface Pymol
e2pks.1 A:-X,Y,-Z+1->A:x,y,z RIFT-related Interaction Interface Pymol
e2pks.1 C:x,y,z->C:-X+1,Y,-Z+1 RIFT-related Interaction Interface Pymol
e2pks.1 C:-X+1,Y,-Z+1->C:x,y,z RIFT-related Interaction Interface Pymol
e2pks.1 C:x,y,z->A:-X+1/2,Y-1/2,-Z+1 RIFT-related Interaction Interface Pymol
e2pks.1 A:-X+1/2,Y-1/2,-Z+1->C:x,y,z RIFT-related Interaction Interface Pymol