ECOD: domain e2pv0A5

Domain ID e2pv0A5

A: few secondary structure elements
X: RING/U-box-like
H: RING/U-box-like
T: FYVE/PHD zinc finger
F: ADD_DNMT3

UID:	001265327
Type:	Automatic domain
Parent:	e3a1bA1
Range:	A:34-89
Ligands:	ZN
PDB:	2pv0
PDB Description:	DNA (cytosine-5)-methyltransferase 3-like
UniProt:	Q9UJW3
Hsap BLAST neighbor:	Q9UJW3
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2pv0A5

Domains in the same chain:

Download Pymol

e2pv0A5	A:34-89	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pv0A4	A:90-184	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pv0A6	A:185-380	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Domains in the same PDB:

e2pv0A5	A:34-89	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pv0A4	A:90-184	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pv0A6	A:185-380	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2pv0B1	B:34-89	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pv0B2	B:90-184	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pv0B3	B:185-380	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2pv0C5	C:34-89	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pv0C4	C:90-184	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pv0C6	C:185-380	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Structural contacts of domain e2pv0A5 of H-group "RING/U-box-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2pv0C5	A:X,Y,Z->C:x,y,z	RING/U-box-like	Interaction Interface Pymol
e2pv0C4	A:X,Y,Z->C:x,y,z	RING/U-box-like	Interaction Interface Pymol