ECOD: domain e2pvcA5

Domain ID e2pvcA5

A: few secondary structure elements
X: RING/U-box-like
H: RING/U-box-like
T: FYVE/PHD zinc finger
F: ADD_DNMT3

UID:	001265330
Type:	Automatic domain
Parent:	e3a1bA1
Range:	A:34-89
Ligands:	ZN
PDB:	2pvc
PDB Description:	DNA (CYTOSINE-5)-METHYLTRANSFERASE 3-LIKE
UniProt:	Q9UJW3
Hsap BLAST neighbor:	Q9UJW3
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2pvcA5

Domains in the same chain:

Download Pymol

e2pvcA5	A:34-89	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pvcA4	A:90-184	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pvcA6	A:185-380	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Domains in the same PDB:

e2pvcA5	A:34-89	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pvcA4	A:90-184	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pvcA6	A:185-380	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2pvcB5	B:34-89	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pvcB4	B:90-184	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pvcB6	B:185-380	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2pvcC5	C:34-89	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pvcC4	C:90-184	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2pvcC6	C:185-380	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Structural contacts of domain e2pvcA5 of H-group "RING/U-box-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2pvcC5	A:X,Y,Z->C:x,y,z	RING/U-box-like	Interaction Interface Pymol