Domain ID e2pymA1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: RVP
UID: 000336887
Type: Automatic domain
Range: A:1-99
Ligands: 1UN
PDB: 2pym
PDB Description: PROTEASE RETROPEPSIN
UniProt: P03367
Species: Human immunodeficiency virus 1

Structure of domain e2pymA1

Structural contacts of domain e2pymA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2pymB1 A:X,Y,Z->B:x,y,z RIFT-related Interaction Interface Pymol
e2pymB1 A:X-Y+1,X+1,Z+1/6->B:x,y,z RIFT-related Interaction Interface Pymol
e2pymA1 A:x,y,z->A:-Y,X-Y+1,Z+1/3 RIFT-related Interaction Interface Pymol
e2pymA1 A:-Y,X-Y+1,Z+1/3->A:x,y,z RIFT-related Interaction Interface Pymol
e2pymB1 A:x,y,z->B:-X,-Y+1,Z-1/2 RIFT-related Interaction Interface Pymol
e2pymB1 A:X-Y,X,Z+1/6->B:x,y,z RIFT-related Interaction Interface Pymol
e2pymA1 A:x,y,z->A:X-Y,X,Z+1/6 RIFT-related Interaction Interface Pymol
e2pymA1 A:X-Y,X,Z+1/6->A:x,y,z RIFT-related Interaction Interface Pymol
e2pymB1 A:x,y,z->B:X-Y,X,Z+1/6 RIFT-related Interaction Interface Pymol