Domain ID e2pynB1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: RVP
UID: 000336890
Type: Automatic domain
Range: B:1-99
Ligands: 1UN
PDB: 2pyn
PDB Description: PROTEASE RETROPEPSIN
UniProt: P03367
Species: Human immunodeficiency virus 1

Structure of domain e2pynB1

Structural contacts of domain e2pynB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2pynA1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e2pynB1 B:x,y,z->B:-Y+1,X-Y+1,Z+1/3 RIFT-related Interaction Interface Pymol
e2pynB1 B:-Y+1,X-Y+1,Z+1/3->B:x,y,z RIFT-related Interaction Interface Pymol
e2pynA1 B:x,y,z->A:X-Y+1,X+1,Z+1/6 RIFT-related Interaction Interface Pymol
e2pynA1 B:-X,-Y+1,Z-1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e2pynA1 B:x,y,z->A:X-Y,X,Z+1/6 RIFT-related Interaction Interface Pymol
e2pynB1 B:x,y,z->B:X-Y,X,Z+1/6 RIFT-related Interaction Interface Pymol
e2pynB1 B:X-Y,X,Z+1/6->B:x,y,z RIFT-related Interaction Interface Pymol
e2pynA1 B:X-Y,X,Z+1/6->A:x,y,z RIFT-related Interaction Interface Pymol