ECOD: domain e2pyyA1

Domain ID e2pyyA1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: Unmapped domains

UID:	001522207
Type:	Automatic domain
Parent:	e1wdnA3
Range:	A:88-182
Ligands:	GLU
PDB:	2pyy
PDB Description:	IONOTROPIC GLUTAMATE RECEPTOR BACTERIAL HOMOLOGUE
UniProt:	D0VWX9
Species:

Domains in the same chain:

Download Pymol

e2pyyA2	A:4-87,A:183-221	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2pyyA1	A:88-182	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e2pyyA2	A:4-87,A:183-221	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2pyyA1	A:88-182	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2pyyB1	B:4-87,B:183-226	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2pyyB2	B:88-182	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2pyyC2	C:4-87,C:183-221	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2pyyC1	C:88-182	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e2pyyA1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2pyyA2	A:x,y,z->A:-X+1,Y,-Z+1/2	Periplasmic binding protein-like II	Interaction Interface Pymol
e2pyyA2	A:-X+1,Y,-Z+1/2->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2pyyB2	A:X,Y,Z->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2pyyB2	A:-X+2,Y,-Z+1/2->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2pyyC1	A:x,y,z->C:X-1/2,-Y+1/2,-Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e2pyyC1	A:x,y,z->C:X-1/2,Y-1/2,Z	Periplasmic binding protein-like II	Interaction Interface Pymol