ECOD: domain e2q1zA1

Domain ID e2q1zA1

A: alpha complex topology
X: Sigma2 domain-like
H: Sigma2 domain of RNA polymerase sigma factors
T: Sigma2 domain of RNA polymerase sigma factors
F: Sigma70_r2

UID:	000165566
Type:	Automatic domain
Parent:	e1or7A2
Range:	A:5-107
PDB:	2q1z
PDB Description:	RpoE, ECF SigE
UniProt:	Q3IYV6
Species:

Domains in the same chain:

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e2q1zA1	A:5-107	Sigma2 domain-like	Sigma2 domain of RNA polymerase sigma factors	Sigma2 domain of RNA polymerase sigma factors
e2q1zA2	A:108-180	HTH	HTH	tri-helical

Domains in the same PDB:

e2q1zA1	A:5-107	Sigma2 domain-like	Sigma2 domain of RNA polymerase sigma factors	Sigma2 domain of RNA polymerase sigma factors
e2q1zA2	A:108-180	HTH	HTH	tri-helical
e2q1zB4	B:2-59	N-terminal, cytoplasmic domain of anti-sigma factors	N-terminal, cytoplasmic domain of anti-sigma factors	N-terminal, cytoplasmic domain of anti-sigma factors
e2q1zB3	B:60-194	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e2q1zC2	C:5-106	Sigma2 domain-like	Sigma2 domain of RNA polymerase sigma factors	Sigma2 domain of RNA polymerase sigma factors
e2q1zC1	C:107-175	HTH	HTH	tri-helical
e2q1zD3	D:2-75	N-terminal, cytoplasmic domain of anti-sigma factors	N-terminal, cytoplasmic domain of anti-sigma factors	N-terminal, cytoplasmic domain of anti-sigma factors
e2q1zD1	D:87-194	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix

Structural contacts of domain e2q1zA1 of H-group "Sigma2 domain of RNA polymerase sigma factors":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2q1zB3	A:X,Y,Z->B:x,y,z	Double-stranded beta-helix	Interaction Interface Pymol
e2q1zB4	A:X,Y,Z->B:x,y,z	N-terminal, cytoplasmic domain of anti-sigma factors	Interaction Interface Pymol
e2q1zA1	A:x,y,z->A:-X+2,-Y,Z	Sigma2 domain of RNA polymerase sigma factors	Interaction Interface Pymol
e2q1zA1	A:-X+2,-Y,Z->A:x,y,z	Sigma2 domain of RNA polymerase sigma factors	Interaction Interface Pymol
e2q1zA2	A:X-1,Y,Z->A:x,y,z	HTH	Interaction Interface Pymol
e2q1zA1	A:x,y,z->A:-X+1,Y,-Z+1	Sigma2 domain of RNA polymerase sigma factors	Interaction Interface Pymol
e2q1zA1	A:-X+1,Y,-Z+1->A:x,y,z	Sigma2 domain of RNA polymerase sigma factors	Interaction Interface Pymol
e2q1zB3	A:-X+1,Y,-Z+1->B:x,y,z	Double-stranded beta-helix	Interaction Interface Pymol