ECOD: domain e2q2uD1

Domain ID e2q2uD1

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: DNA_ligase_OB_2

UID:	000024088
Type:	Automatic domain
Parent:	e1fviA1
Range:	D:190-293
PDB:	2q2u
PDB Description:	Chlorella virus DNA ligase
UniProt:	O41026
Species:	Paramecium bursaria Chlorella virus 1

Domains in the same chain:

Download Pymol

e2q2uD3	D:1-189	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2q2uD1	D:190-293	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e2q2uA3	A:1-189	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2q2uA1	A:190-293	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2q2uB3	B:1-189	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2q2uB1	B:190-293	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2q2uC3	C:1-189	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2q2uC1	C:190-293	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2q2uD3	D:1-189	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2q2uD1	D:190-293	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e2q2uD1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2q2uA3	D:x,y,z->A:X,Y-1,Z-1	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e2q2uC1	D:x,y,z->C:X,Y,Z-1	Nucleic acid-binding proteins	Interaction Interface Pymol