ECOD: domain e2q41C2

Domain ID e2q41C2

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: S-adenosyl-L-methionine-dependent methyltransferases
F: Spermine_synth

UID:	001179666
Type:	Automatic domain
Parent:	e1inlA3
Range:	C:102-330
PDB:	2q41
PDB Description:	SPERMIDINE SYNTHASE 1
UniProt:	Q9ZUB3
Hsap BLAST neighbor:	P19623
Species:	Arabidopsis thaliana

Domains in the same chain:

Download Pymol

e2q41C3	C:41-101	Spermidine synthase tetramerisation domain	Spermidine synthase tetramerisation domain	Spermidine synthase tetramerisation domain
e2q41C2	C:102-330	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Domains in the same PDB:

e2q41A3	A:41-101	Spermidine synthase tetramerisation domain	Spermidine synthase tetramerisation domain	Spermidine synthase tetramerisation domain
e2q41A2	A:102-330	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2q41B3	B:38-101	Spermidine synthase tetramerisation domain	Spermidine synthase tetramerisation domain	Spermidine synthase tetramerisation domain
e2q41B2	B:102-330	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2q41C3	C:41-101	Spermidine synthase tetramerisation domain	Spermidine synthase tetramerisation domain	Spermidine synthase tetramerisation domain
e2q41C2	C:102-330	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2q41D3	D:38-101	Spermidine synthase tetramerisation domain	Spermidine synthase tetramerisation domain	Spermidine synthase tetramerisation domain
e2q41D2	D:102-330	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Structural contacts of domain e2q41C2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2q41B2	C:x,y,z->B:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e2q41B3	C:x,y,z->B:X,Y,Z	Spermidine synthase tetramerisation domain	Interaction Interface Pymol
e2q41A3	C:x,y,z->A:X,Y,Z	Spermidine synthase tetramerisation domain	Interaction Interface Pymol
e2q41D2	C:X,Y,Z-1->D:x,y,z	Rossmann-related	Interaction Interface Pymol
e2q41D3	C:X,Y,Z->D:x,y,z	Spermidine synthase tetramerisation domain	Interaction Interface Pymol
e2q41B2	C:-X+1,Y-1/2,-Z+3->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e2q41A2	C:X,Y,Z-1->A:x,y,z	Rossmann-related	Interaction Interface Pymol