Domain ID e2qadE2

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  • A: a+b two layers
  • X: gp120 inner domain
  • H: gp120 inner domain
  • T: gp120 inner domain
  • F: GP120
UID: 001829742
Type: Automatic domain
Parent: e2nxyA3
Range: E:90-255,E:474-492
Ligands: EDO NAG
PDB: 2qad
PDB Description: Envelope glycoprotein gp160
UniProt: P35961
Species: Human immunodeficiency virus 1

Structure of domain e2qadE2

Domains in the same chain:

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e2qadE2 E:90-255,E:474-492 gp120 inner domain gp120 inner domain gp120 inner domain
e2qadE1 E:256-473 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain

Domains in the same PDB:

e2qadA2 A:90-255,A:474-492 gp120 inner domain gp120 inner domain gp120 inner domain
e2qadA1 A:256-473 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e2qadB1 B:1-97 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qadB2 B:98-178 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qadC1 C:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qadC2 C:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qadD1 D:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qadD2 D:114-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qadE2 E:90-255,E:474-492 gp120 inner domain gp120 inner domain gp120 inner domain
e2qadE1 E:256-473 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e2qadF1 F:1-97 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qadF2 F:98-178 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qadG1 G:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qadG2 G:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qadH1 H:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qadH2 H:114-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2qadE2 of H-group "gp120 inner domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2qadA1 E:x,y,z->A:X,Y,Z Ribosomal protein L31e/gp120 outer domain Interaction Interface Pymol
e2qadF1 E:X,Y,Z->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2qadH1 E:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2qadH1 E:x,y,z->H:X,Y-1,Z Immunoglobulin-related Interaction Interface Pymol
e2qadE1 E:x,y,z->E:X,Y-1,Z Ribosomal protein L31e/gp120 outer domain Interaction Interface Pymol
e2qadG1 E:X,Y,Z->G:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2qadD2 E:X-1,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol