Domain ID e2qam01

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L32p
UID: 000008025
Type: Manual and representative domain
Range: 0:1-56
PDB: 2qam
PDB Description:
Species:

Structure of domain e2qam01

Domains in the same chain:

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e2qam01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e2qam01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2qam21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e2qam31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e2qam41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e2qamC3 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2qamC4 C:125-271 SH3 SH3 SH3
e2qamE2 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e2qamF1 F:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e2qamG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2qamG1 G:82-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2qamH2 H:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e2qamI3 I:1-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e2qamI4 I:74-141 HTH HTH Ribosomal protein L11, C-terminal domain
e2qamJ1 J:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e2qamK1 K:2-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e2qamN1 N:14-117 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e2qamR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e2qamS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e2qamT1 T:6-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2qamU2 U:1-102 SH3 SH3 SH3
e2qamV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e2qamW1 W:19-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2qamX1 X:1-60 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e2qamY1 Y:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e2qamZ1 Z:2-78 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28

Structural contacts of domain e2qam01 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2qamS1 0:X,Y,Z->S:x,y,z Ribosomal protein L22 Interaction Interface Pymol
e2qamN1 0:X,Y,Z->N:x,y,z Prokaryotic ribosomal protein L17 Interaction Interface Pymol
e2qamN1 0:X,Y,Z->Q:x,y,z Prokaryotic ribosomal protein L17 Interaction Interface Pymol