ECOD: domain e2qjyM3

Domain ID e2qjyM3

A: alpha bundles
X: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
F: Cytochrom_B_C

UID:	001225065
Type:	Automatic domain
Parent:	e1ppjC1
Range:	M:285-430
Ligands:	HEM LOP SMA
PDB:	2qjy
PDB Description:	Cytochrome b
UniProt:	Q02761
Hsap BLAST neighbor:	P00156
Species:	Rhodobacter sphaeroides

Domains in the same chain:

Download Pymol

e2qjyM2	M:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2qjyM3	M:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Domains in the same PDB:

e2qjyA2	A:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2qjyA3	A:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2qjyB1	B:1-256	Cytochrome c-like	Cytochrome c	Cytochrome c
e2qjyC1	C:9-45	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e2qjyC2	C:46-127,C:171-187	ISP domain	ISP domain	ISP domain
e2qjyC3	C:128-170	Trm112p-like	Trm112p-like	Trm112p-like
e2qjyD2	D:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2qjyD3	D:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2qjyE1	E:1-256	Cytochrome c-like	Cytochrome c	Cytochrome c
e2qjyF2	F:9-41	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e2qjyF3	F:46-127,F:171-187	ISP domain	ISP domain	ISP domain
e2qjyF4	F:128-170	Trm112p-like	Trm112p-like	Trm112p-like
e2qjyG2	G:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2qjyG3	G:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2qjyH1	H:1-256	Cytochrome c-like	Cytochrome c	Cytochrome c
e2qjyI2	I:9-41	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e2qjyI4	I:46-127,I:171-187	ISP domain	ISP domain	ISP domain
e2qjyI3	I:128-170	Trm112p-like	Trm112p-like	Trm112p-like
e2qjyJ2	J:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2qjyJ3	J:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2qjyK1	K:1-256	Cytochrome c-like	Cytochrome c	Cytochrome c
e2qjyL2	L:9-41	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e2qjyL3	L:46-127,L:171-187	ISP domain	ISP domain	ISP domain
e2qjyL4	L:128-170	Trm112p-like	Trm112p-like	Trm112p-like
e2qjyM2	M:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2qjyM3	M:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2qjyN1	N:1-256	Cytochrome c-like	Cytochrome c	Cytochrome c
e2qjyO2	O:9-41	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e2qjyO4	O:46-127,O:171-187	ISP domain	ISP domain	ISP domain
e2qjyO3	O:128-170	Trm112p-like	Trm112p-like	Trm112p-like
e2qjyP2	P:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2qjyP3	P:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2qjyQ1	Q:1-256	Cytochrome c-like	Cytochrome c	Cytochrome c
e2qjyR2	R:9-41	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e2qjyR4	R:46-127,R:171-187	ISP domain	ISP domain	ISP domain
e2qjyR3	R:128-170	Trm112p-like	Trm112p-like	Trm112p-like

Structural contacts of domain e2qjyM3 of H-group "a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2qjyN1	M:X,Y,Z->N:x,y,z	Cytochrome c	Interaction Interface Pymol
e2qjyN1	M:X,Y,Z->R:x,y,z	Cytochrome c	Interaction Interface Pymol
e2qjyJ3	M:x,y,z->J:X,Y,Z	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Interaction Interface Pymol