Domain ID e2qoxE1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L4
  • H: Ribosomal protein L4
  • T: Ribosomal protein L4
  • F: Ribosomal_L4
UID: 000109929
Type: Automatic domain
Parent: e1dmgA1
Range: E:1-198
PDB: 2qox
PDB Description:
Hsap BLAST neighbor: Q9BYD3
Species:

Structure of domain e2qoxE1

Domains in the same chain:

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e2qoxE1 E:1-198 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4

Domains in the same PDB:

e2qox01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2qox21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e2qox31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e2qox41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e2qoxC3 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2qoxC4 C:125-271 SH3 SH3 SH3
e2qoxE1 E:1-198 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e2qoxF1 F:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e2qoxG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2qoxG1 G:82-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2qoxH2 H:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e2qoxI3 I:1-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e2qoxI4 I:74-141 HTH HTH Ribosomal protein L11, C-terminal domain
e2qoxJ1 J:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e2qoxK1 K:2-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e2qoxN1 N:14-117 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e2qoxR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e2qoxS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e2qoxT1 T:6-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2qoxU2 U:1-102 SH3 SH3 SH3
e2qoxV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e2qoxW1 W:19-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2qoxX1 X:1-60 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e2qoxY1 Y:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e2qoxZ1 Z:2-78 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28

Structural contacts of domain e2qoxE1 of H-group "Ribosomal protein L4":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dmgA1 E:X,Y,Z->L:x,y,z Ribosomal protein L4 Interaction Interface Pymol