ECOD: domain e2qqoB2

Domain ID e2qqoB2

A: beta sandwiches
X: jelly-roll
H: Galactose-binding domain-like
T: Galactose-binding domain-like
F: F5_F8_type_C

UID:	000331703
Type:	Automatic domain
Parent:	e2qqiA2
Range:	B:433-593
Ligands:	EDO
PDB:	2qqo
PDB Description:	Neuropilin-2
UniProt:	O60462
Hsap BLAST neighbor:	O60462
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2qqoB2

Domains in the same chain:

Download Pymol

e2qqoB5	B:148-268	jelly-roll	Spermadhesin, CUB domain	Spermadhesin, CUB domain
e2qqoB4	B:275-432	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2qqoB2	B:433-593	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like

Domains in the same PDB:

Structural contacts of domain e2qqoB2 of H-group "Galactose-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2qqoA1	B:-X,Y-1/2,-Z+1->A:x,y,z	Galactose-binding domain-like	Interaction Interface Pymol

e2qqoA5	A:148-268	jelly-roll	Spermadhesin, CUB domain	Spermadhesin, CUB domain
e2qqoA4	A:275-432	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2qqoA1	A:433-595	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2qqoB5	B:148-268	jelly-roll	Spermadhesin, CUB domain	Spermadhesin, CUB domain
e2qqoB4	B:275-432	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2qqoB2	B:433-593	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like