Domain ID e2qvwB4

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  • A: a+b two layers
  • X: Giardia Dicer N-terminal domain
  • H: Giardia Dicer N-terminal domain
  • T: Giardia Dicer N-terminal domain
  • F: Dicer_N
UID: 001168812
Type: Automatic domain
Parent: e2fflA1
Range: B:0-143,B:248-263
Ligands: MN
PDB: 2qvw
PDB Description: GLP_546_48378_50642
UniProt: A8BQJ3
Species: Giardia intestinalis

Structure of domain e2qvwB4

Domains in the same chain:

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e2qvwB4 B:0-143,B:248-263 Giardia Dicer N-terminal domain Giardia Dicer N-terminal domain Giardia Dicer N-terminal domain
e2qvwB5 B:144-247 SH3 SH3 SH3
e2qvwB3 B:264-430 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e2qvwB1 B:431-579 Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb
e2qvwB6 B:604-754 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like

Domains in the same PDB:

e2qvwA4 A:-1-143,A:248-263 Giardia Dicer N-terminal domain Giardia Dicer N-terminal domain Giardia Dicer N-terminal domain
e2qvwA5 A:144-247 SH3 SH3 SH3
e2qvwA3 A:264-430 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e2qvwA1 A:431-579 Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb
e2qvwA2 A:604-754 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e2qvwB4 B:0-143,B:248-263 Giardia Dicer N-terminal domain Giardia Dicer N-terminal domain Giardia Dicer N-terminal domain
e2qvwB5 B:144-247 SH3 SH3 SH3
e2qvwB3 B:264-430 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e2qvwB1 B:431-579 Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb
e2qvwB6 B:604-754 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e2qvwC3 C:0-143,C:248-263 Giardia Dicer N-terminal domain Giardia Dicer N-terminal domain Giardia Dicer N-terminal domain
e2qvwC4 C:144-247 SH3 SH3 SH3
e2qvwC2 C:264-430 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e2qvwC1 C:431-579 Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb
e2qvwC5 C:604-754 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e2qvwD3 D:0-143,D:248-263 Giardia Dicer N-terminal domain Giardia Dicer N-terminal domain Giardia Dicer N-terminal domain
e2qvwD4 D:144-247 SH3 SH3 SH3
e2qvwD2 D:264-430 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e2qvwD1 D:431-579 Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb Giardia Dicer helical domain bridging RNase IIIa and RNase IIIb
e2qvwD5 D:604-754 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like

Structural contacts of domain e2qvwB4 of H-group "Giardia Dicer N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2qvwA4 B:x,y,z->A:-X+1/2,Y-1/2,-Z Giardia Dicer N-terminal domain Interaction Interface Pymol
e2qvwA2 B:X-1/2,-Y+1/2,-Z->A:x,y,z RNase III catalytic domain-like Interaction Interface Pymol