Domain ID e2r7xA2

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RdRP_4
UID: 000346043
Type: Automatic domain
Parent: e2r7oA2
Range: A:339-672
Ligands: GTP
PDB: 2r7x
PDB Description: RNA-dependent RNA polymerase
UniProt: P22678
Species:

Structure of domain e2r7xA2

Domains in the same chain:

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e2r7xA1 A:2-338 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3
e2r7xA2 A:339-672 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2r7xA4 A:673-771 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e2r7xA3 A:772-1088 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3

Domains in the same PDB:

e2r7xA1 A:2-338 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3
e2r7xA2 A:339-672 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2r7xA4 A:673-771 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e2r7xA3 A:772-1088 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3
e2r7xB1 B:2-338 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3
e2r7xB2 B:339-672 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2r7xB4 B:673-771 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e2r7xB3 B:772-1088 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3

Structural contacts of domain e2r7xA2 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2r7xB3 A:X-1,Y,Z->B:x,y,z C-terminal additional helical subdomain in reovirus polymerase lambda3 Interaction Interface Pymol
e2r7xA1 A:X-1,Y,Z->A:x,y,z N-terminal additional helical subdomain in reovirus polymerase lambda3 Interaction Interface Pymol
e2r7xB3 A:X-1,Y,Z-1->B:x,y,z C-terminal additional helical subdomain in reovirus polymerase lambda3 Interaction Interface Pymol
e2r7xB2 A:X-1,Y,Z-1->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2r7xB2 A:X,Y,Z-1->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2r7xB1 A:x,y,z->B:-X+1,Y-1/2,-Z+1 N-terminal additional helical subdomain in reovirus polymerase lambda3 Interaction Interface Pymol