Domain ID e2r8jA2

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  • A: a+b two layers
  • X: Reverse ferredoxin
  • H: Lesion bypass DNA polymerase (Y-family), little finger domain
  • T: Lesion bypass DNA polymerase (Y-family), little finger domain
  • F: IMS_C
UID: 000063405
Type: Automatic domain
Parent: e1jx4A2
Range: A:390-509
PDB: 2r8j
PDB Description: DNA POLYMERASE ETA
UniProt: Q04049
Species: Saccharomyces cerevisiae

Structure of domain e2r8jA2

Domains in the same chain:

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e2r8jA3 A:1-43,A:127-296 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2r8jA4 A:44-126 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e2r8jA1 A:297-388 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2r8jA2 A:390-509 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e2r8jA3 A:1-43,A:127-296 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2r8jA4 A:44-126 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e2r8jA1 A:297-388 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2r8jA2 A:390-509 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e2r8jB3 B:1-43,B:127-296 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2r8jB4 B:44-126 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e2r8jB1 B:297-388 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2r8jB2 B:390-509 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e2r8jA2 of H-group "Lesion bypass DNA polymerase (Y-family), little finger domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2r8jB3 A:X,Y,Z->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2r8jB3 A:x,y,z->B:-Y-1/2,X-1/2,Z+1/4 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2r8jB1 A:Y+1,X-1,-Z->B:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol