Domain ID e2r8kB1

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  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: Unmapped domains
UID: 000048262
Type: Automatic domain
Parent: e1jihA1
Range: B:297-388
PDB: 2r8k
PDB Description: DNA POLYMERASE ETA
UniProt: Q04049
Species: Saccharomyces cerevisiae

Structure of domain e2r8kB1

Domains in the same chain:

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e2r8kB3 B:1-43,B:127-296 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2r8kB4 B:44-126 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e2r8kB1 B:297-388 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2r8kB2 B:390-509 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e2r8kA3 A:1-43,A:127-296 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2r8kA4 A:44-126 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e2r8kA1 A:297-388 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2r8kA2 A:390-509 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e2r8kB3 B:1-43,B:127-296 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2r8kB4 B:44-126 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e2r8kB1 B:297-388 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2r8kB2 B:390-509 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e2r8kB1 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2r8kA2 B:x,y,z->A:Y+1,X-1,-Z Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol