ECOD: domain e2rddB1

Domain ID e2rddB1

A: extended segments
X: Preprotein translocase subunit YajC
H: Preprotein translocase subunit YajC
T: Preprotein translocase subunit YajC
F: YajC

UID:	000184906
Type:	Manual and representative domain
Range:	B:19-55
PDB:	2rdd
PDB Description:	UPF0092 MEMBRANE PROTEIN YAJC
UniProt:	P0ADZ7
Species:	Escherichia coli

Domains in the same chain:

Download Pymol

e2rddB1	B:19-55	Preprotein translocase subunit YajC	Preprotein translocase subunit YajC	Preprotein translocase subunit YajC

Domains in the same PDB:

e2rddA11	A:1-37,A:331-498	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e2rddA12	A:38-134	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e2rddA15	A:135-181,A:274-330	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e2rddA7	A:182-273	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e2rddA10	A:499-552,A:845-1036	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e2rddA13	A:553-659	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e2rddA14	A:660-709,A:798-844	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e2rddA9	A:710-797	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e2rddB1	B:19-55	Preprotein translocase subunit YajC	Preprotein translocase subunit YajC	Preprotein translocase subunit YajC

Structural contacts of domain e2rddB1 of H-group "Preprotein translocase subunit YajC":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2rddA11	B:x,y,z->A:X,Y,Z	Multidrug efflux transporter AcrB transmembrane domain	Interaction Interface Pymol
e2rddA10	B:x,y,z->A:X,Y,Z	Multidrug efflux transporter AcrB transmembrane domain	Interaction Interface Pymol
e2rddA10	B:x,y,z->A:-X,-X+Y,-Z	Multidrug efflux transporter AcrB transmembrane domain	Interaction Interface Pymol