| UID: | 000076574 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2retB1 |
| Range: | D:35-197 |
| Ligands: | CL |
| PDB: | 2ret |
| PDB Description: | EpsJ |
| UniProt: | Q7MPZ0 |
| Species: | Vibrio vulnificus |
Structure of domain e2retD1
Domains in the same chain:
| e2retD1 | D:35-197 | Pili subunits | Pili subunits | Pili subunits |
Domains in the same PDB:
| e2retA1 | A:30-110 | Pili subunits | Pili subunits | Pili subunits |
| e2retB1 | B:32-197 | Pili subunits | Pili subunits | Pili subunits |
| e2retC1 | C:30-110 | Pili subunits | Pili subunits | Pili subunits |
| e2retD1 | D:35-197 | Pili subunits | Pili subunits | Pili subunits |
| e2retE1 | E:30-110 | Pili subunits | Pili subunits | Pili subunits |
| e2retF1 | F:33-196 | Pili subunits | Pili subunits | Pili subunits |
| e2retG1 | G:30-110 | Pili subunits | Pili subunits | Pili subunits |
| e2retH1 | H:32-196 | Pili subunits | Pili subunits | Pili subunits |
Structural contacts of domain e2retD1 of H-group "Pili subunits":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2retB1 | D:x,y,z->B:X,Y,Z | Pili subunits | Interaction Interface Pymol |
| e2retC1 | D:x,y,z->C:X,Y,Z | Pili subunits | Interaction Interface Pymol |
| e2retA1 | D:x,y,z->A:X,Y,Z | Pili subunits | Interaction Interface Pymol |
| e2retA1 | D:x,y,z->A:X-1,Y,Z | Pili subunits | Interaction Interface Pymol |
| e2retE1 | D:x,y,z->E:X,Y,Z | Pili subunits | Interaction Interface Pymol |
| e2retE1 | D:x,y,z->E:X-1,Y+1,Z | Pili subunits | Interaction Interface Pymol |
| e2retH1 | D:x,y,z->H:X-1,Y,Z+1 | Pili subunits | Interaction Interface Pymol |
| e2retH1 | D:X,Y,Z->H:x,y,z | Pili subunits | Interaction Interface Pymol |
