ECOD: domain e2rfgA1

Domain ID e2rfgA1

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: DHDPS

UID:	000166053
Type:	Automatic domain
Parent:	e1hl2A1
Range:	A:1-289
Ligands:	EOH MG
PDB:	2rfg
PDB Description:	DIHYDRODIPICOLINATE SYNTHASE
UniProt:	Q2S9K4
Hsap BLAST neighbor:	Q86XE5
Species:	Hahella chejuensis

Domains in the same chain:

Download Pymol

e2rfgA1	A:1-289	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

e2rfgA1	A:1-289	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2rfgB1	B:1-297	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2rfgC1	C:1-289	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2rfgD1	D:1-289	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Structural contacts of domain e2rfgA1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2rfgD1	A:X,Y,Z->D:x,y,z	TIM barrels	Interaction Interface Pymol
e2rfgB1	A:X,Y,Z->B:x,y,z	TIM barrels	Interaction Interface Pymol
e2rfgA1	A:x,y,z->A:X-1/2,-Y-1/2,-Z	TIM barrels	Interaction Interface Pymol
e2rfgA1	A:X-1/2,-Y-1/2,-Z->A:x,y,z	TIM barrels	Interaction Interface Pymol
e2rfgB1	A:X-1,Y,Z->B:x,y,z	TIM barrels	Interaction Interface Pymol
e2rfgB1	A:X-1/2,-Y-1/2,-Z->B:x,y,z	TIM barrels	Interaction Interface Pymol
e2rfgC1	A:x,y,z->C:-X-1,Y-1/2,-Z+1/2	TIM barrels	Interaction Interface Pymol
e2rfgC1	A:x,y,z->C:-X-1/2,-Y,Z-1/2	TIM barrels	Interaction Interface Pymol