| UID: | 001675647 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1ml9A2 |
| Range: | B:978-1026,B:1093-1212 |
| Ligands: | SAH ZN |
| PDB: | 2rfi |
| PDB Description: | HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC 5 |
| UniProt: | Q9H9B1 |
| Hsap BLAST neighbor: | Q9H9B1 |
| Species: | Homo sapiens |
Structure of domain e2rfiB1
Domains in the same chain:
| e2rfiB1 | B:978-1026,B:1093-1212 | beta-clip | SET domain-like | SET domain-like |
| e2rfiB2 | B:1027-1092 | Zn3Cys9 preSET domain-related | Zn3Cys9 preSET domain-related | Zn3Cys9 preSET domain-related |
Domains in the same PDB:
| e2rfiA3 | A:975-1026,A:1093-1212 | beta-clip | SET domain-like | SET domain-like |
| e2rfiA2 | A:1027-1092 | Zn3Cys9 preSET domain-related | Zn3Cys9 preSET domain-related | Zn3Cys9 preSET domain-related |
| e2rfiB1 | B:978-1026,B:1093-1212 | beta-clip | SET domain-like | SET domain-like |
| e2rfiB2 | B:1027-1092 | Zn3Cys9 preSET domain-related | Zn3Cys9 preSET domain-related | Zn3Cys9 preSET domain-related |
Structural contacts of domain e2rfiB1 of H-group "SET domain-like":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2rfiA2 | B:x,y,z->A:X,Y,Z | Zn3Cys9 preSET domain-related | Interaction Interface Pymol |
| e2rfiA3 | B:x,y,z->A:X,Y,Z | SET domain-like | Interaction Interface Pymol |
| e2rfiA2 | B:x,y,z->A:-X+1/2,-Y+1,Z-1/2 | Zn3Cys9 preSET domain-related | Interaction Interface Pymol |
| e2rfiA3 | B:-X+1/2,-Y+1,Z-1/2->A:x,y,z | SET domain-like | Interaction Interface Pymol |
