ECOD: domain e2rkkA1

Domain ID e2rkkA1

A: alpha bundles
X: Spectrin repeat-like
H: MIT domain
T: MIT domain
F: Vta1

UID:	001282289
Type:	Automatic domain
Parent:	e2luhA2
Range:	A:74-167
PDB:	2rkk
PDB Description:	Vacuolar protein sorting-associated protein VTA1
UniProt:	Q06263
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e2rkkA2	A:1A-73	Spectrin repeat-like	MIT domain	MIT domain
e2rkkA1	A:74-167	Spectrin repeat-like	MIT domain	MIT domain

Domains in the same PDB:

e2rkkA2	A:1A-73	Spectrin repeat-like	MIT domain	MIT domain
e2rkkA1	A:74-167	Spectrin repeat-like	MIT domain	MIT domain
e2rkkB2	B:1A-73	Spectrin repeat-like	MIT domain	MIT domain
e2rkkB1	B:74-167	Spectrin repeat-like	MIT domain	MIT domain

Structural contacts of domain e2rkkA1 of H-group "MIT domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2rkkB2	A:X,Y,Z->B:x,y,z	MIT domain	Interaction Interface Pymol
e2rkkB1	A:X,Y,Z->B:x,y,z	MIT domain	Interaction Interface Pymol
e2rkkB1	A:-Y,X,Z->B:x,y,z	MIT domain	Interaction Interface Pymol
e2rkkB2	A:x,y,z->B:-X+1/2,-Y+1/2,Z-1/2	MIT domain	Interaction Interface Pymol
e2rkkB1	A:x,y,z->B:-X+1/2,-Y+1/2,Z-1/2	MIT domain	Interaction Interface Pymol