Domain ID e2rkmA2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: SBP_bac_5
UID: 001522470
Type: Automatic domain
Parent: e1jetA3
Range: A:1-45,A:166-269,A:486-517
Ligands: IUM LYS
PDB: 2rkm
PDB Description: OLIGO-PEPTIDE BINDING PROTEIN
UniProt: P06202
Species:

Structure of domain e2rkmA2

Structural contacts of domain e2rkmA2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2rkmA1 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e2rkmA1 A:-X,Y-1/2,-Z+1/2->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2rkmA3 A:x,y,z->A:X-1/2,-Y+1/2,-Z Oligo-peptide binding protein (OPPA) insertion domain Interaction Interface Pymol
e2rkmA2 A:x,y,z->A:X-1/2,-Y+1/2,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e2rkmA2 A:X-1/2,-Y+1/2,-Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2rkmA1 A:x,y,z->A:X,Y,Z-1 Periplasmic binding protein-like II Interaction Interface Pymol