ECOD: domain e2rkwB12

Domain ID e2rkwB12

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: ATP-synt_ab_N

UID:	001214116
Type:	Automatic domain
Parent:	e2jdiA1
Range:	B:10-74
PDB:	2rkw
PDB Description:	V-type ATP synthase beta chain
UniProt:	Q60187
Hsap BLAST neighbor:	P21281
Species:	Methanosarcina mazei

Domain
In chain context
In PDB context

Structure of domain e2rkwB12

Domains in the same chain:

Download Pymol

e2rkwB12	B:10-74	cradle loop barrel	RIFT-related	Alanine racemase-C
e2rkwB10	B:75-354	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2rkwB11	B:355-457	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase

Domains in the same PDB:

e2rkwA9	A:11-76	cradle loop barrel	RIFT-related	Alanine racemase-C
e2rkwA7	A:77-354	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2rkwA8	A:355-457	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2rkwB12	B:10-74	cradle loop barrel	RIFT-related	Alanine racemase-C
e2rkwB10	B:75-354	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2rkwB11	B:355-457	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase

Structural contacts of domain e2rkwB12 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2rkwA8	B:x,y,z->A:X,Y,Z	C-terminal domain of alpha and beta subunits of F1 ATP synthase	Interaction Interface Pymol
e2rkwA7	B:x,y,z->A:-X-1/2,-Y,Z-1/2	P-loop domains-related	Interaction Interface Pymol
e2rkwA7	B:x,y,z->A:X-1/2,-Y-1/2,-Z	P-loop domains-related	Interaction Interface Pymol
e2rkwA8	B:x,y,z->A:X-1/2,-Y-1/2,-Z	C-terminal domain of alpha and beta subunits of F1 ATP synthase	Interaction Interface Pymol