ECOD: domain e2sqcA1

Domain ID e2sqcA1

A: alpha superhelices
X: Repetitive alpha hairpins
H: alpha/alpha toroid
T: alpha/alpha toroid
F: SQHop_cyclase_C

UID:	000004479
Type:	Manual and representative domain
Range:	A:8-36,A:308-630
Ligands:	C8E
PDB:	2sqc
PDB Description:	SQUALENE-HOPENE CYCLASE
UniProt:	P33247
Hsap BLAST neighbor:	P48449
Species:	Alicyclobacillus acidocaldarius

Domains in the same chain:

Download Pymol

e2sqcA1	A:8-36,A:308-630	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid
e2sqcA2	A:37-307	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid

Domains in the same PDB:

e2sqcA1	A:8-36,A:308-630	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid
e2sqcA2	A:37-307	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid
e2sqcB1	B:8-36,B:308-630	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid
e2sqcB2	B:37-307	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid

Structural contacts of domain e2sqcA1 of H-group "alpha/alpha toroid":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2sqcB2	A:X,Y,Z->B:x,y,z	alpha/alpha toroid	Interaction Interface Pymol
e2sqcB2	A:x,y,z->B:X-1/2,-Y+3/2,-Z+1/4	alpha/alpha toroid	Interaction Interface Pymol
e2sqcB1	A:x,y,z->B:X-1,Y,Z	alpha/alpha toroid	Interaction Interface Pymol