ECOD: domain e2tbvC1

Domain ID e2tbvC1

A: beta sandwiches
X: jelly-roll
H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
F: Viral_coat

UID:	001758310
Type:	Automatic domain
Parent:	e2tbvA2
Range:	C:67-270
Ligands:	CA
PDB:	2tbv
PDB Description:	TOMATO BUSHY STUNT VIRUS
UniProt:	P11795
Species:	Tomato bushy stunt virus

Domains in the same chain:

Download Pymol

e2tbvC1	C:67-270	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2tbvC2	C:271-387	jelly-roll	ssRNA positive-strand viruses coat protein P (projecting) domain	ssRNA positive-strand viruses coat protein P (projecting) domain

Domains in the same PDB:

e2tbvA2	A:102-270	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2tbvA3	A:271-387	jelly-roll	ssRNA positive-strand viruses coat protein P (projecting) domain	ssRNA positive-strand viruses coat protein P (projecting) domain
e2tbvB1	B:101-270	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2tbvB2	B:271-387	jelly-roll	ssRNA positive-strand viruses coat protein P (projecting) domain	ssRNA positive-strand viruses coat protein P (projecting) domain
e2tbvC1	C:67-270	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2tbvC2	C:271-387	jelly-roll	ssRNA positive-strand viruses coat protein P (projecting) domain	ssRNA positive-strand viruses coat protein P (projecting) domain

Structural contacts of domain e2tbvC1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2tbvC1	C:x,y,z->C:-X,-Y,Z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e2tbvC2	C:x,y,z->C:-X,-Y,Z	ssRNA positive-strand viruses coat protein P (projecting) domain	Interaction Interface Pymol
e2tbvC2	C:-X,-Y,Z->C:x,y,z	ssRNA positive-strand viruses coat protein P (projecting) domain	Interaction Interface Pymol
e2tbvC1	C:-X,-Y,Z->C:x,y,z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e2tbvB1	C:x,y,z->B:-X,-Y,Z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e2tbvA2	C:x,y,z->A:X,Y,Z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e2tbvB1	C:x,y,z->B:X,Y,Z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol