ECOD: domain e2uupA2

Domain ID e2uupA2

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Mur_ligase_M

UID:	000103002
Type:	Automatic domain
Parent:	e1j6uA2
Range:	A:94-297
Ligands:	LK4 SO4
PDB:	2uup
PDB Description:	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
UniProt:	P14900
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e2uupA2

Domains in the same chain:

Download Pymol

e2uupA1	A:1-93	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e2uupA2	A:94-297	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2uupA3	A:298-437	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Domains in the same PDB:

e2uupA1	A:1-93	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e2uupA2	A:94-297	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2uupA3	A:298-437	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Structural contacts of domain e2uupA2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2uupA2	A:x,y,z->A:-Y-1,X,Z+1/4	P-loop domains-related	Interaction Interface Pymol
e2uupA3	A:x,y,z->A:-Y-1,X,Z+1/4	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol
e2uupA2	A:-Y-1,X,Z+1/4->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2uupA1	A:x,y,z->A:-Y,X,Z+1/4	Rossmann-related	Interaction Interface Pymol